Models for microtubule cargo transport coupling the Langevin equation to stochastic stepping motor dynamics: Caring about fluctuations

cnea.localizacionCentro Atómico Bariloche
cnea.tipodocumentoARTÍCULO CIENTÍFICO
dc.contributor.authorBouzat, Sebastian
dc.date.accessioned2024-04-30T15:17:22Z
dc.date.available2024-04-30T15:17:22Z
dc.date.issued2016-01-04
dc.description.abstractOne-dimensional models coupling a Langevin equation for the cargo position to stochastic stepping dynamics for the motors constitute a relevant framework for analyzing multiple-motor microtubule transport. In this work we explore the consistence of these models focusing on the effects of the thermal noise. We study how to define consistent stepping and detachment rates for the motors as functions of the local forces acting on them in such a way that the cargo velocity and run-time match previously specified functions of the external load, which are set on the base of experimental results. We show that due to the influence of the thermal fluctuations this is not a trivial problem, even for the single-motor case. As a solution, we propose a motor stepping dynamics which considers memory on the motor force. This model leads to better results for single-motor transport than the approaches previously considered in the literature. Moreover, it gives a much better prediction for the stall force of the two-motor case, highly compatible with the experimental findings. We also analyze the fast fluctuations of the cargo position and the influence of the viscosity, comparing the proposed model to the standard one, and we show how the differences on the single-motor dynamics propagate to the multiple motor situations. Finally, we find that the one-dimensional character of the models impede an appropriate description of the fast fluctuations of the cargo position at small loads. We show how this problem can be solved by considering two-dimensional models.
dc.description.institutionalaffiliationFil.: Bouzat, Sebastián. Comisión Nacional de Energía Atómica. Instituto Balseiro; Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
dc.format.extent16 p.
dc.identifier.citationSebastián Bouzat. Phys. Rev. E 93, 012401
dc.identifier.doihttps://doi.org/10.1103/PhysRevE.93.012401
dc.identifier.issn2470-0053
dc.identifier.issn2470-0045
dc.identifier.urihttps://nuclea.cnea.gob.ar/handle/20.500.12553/5221
dc.language.ISO639-3eng
dc.publisherAmerican Physical Society
dc.relation.ispartofv. 93, n. 1
dc.relation.ispartofseriesPhysical Review E
dc.rights.accesslevelinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by-nc-sa/4.0/
dc.subject.inisTERMODINAMICA
dc.subject.inisECUACION DE LANGEVIN
dc.subject.inisELASTICIDAD
dc.subject.keywordThermodynamics
dc.subject.keywordLangevin equation
dc.subject.keywordElastic properties
dc.titleModels for microtubule cargo transport coupling the Langevin equation to stochastic stepping motor dynamics: Caring about fluctuations
dc.typeARTÍCULO
dc.type.openaireinfo:eu-repo/semantics/article
dc.type.snrdinfo:ar-repo/semantics/artículo
dc.type.versioninfo:eu-repo/semantics/publishedVersion

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